CB Department CB Department

M.Tech Thesis Defense

2023 - 25 Batch

Title » Multipurpose Denoising Autoencoder based framework for understanding taxa specific states in the gut microbiome - Shruti Khare
Title » Prediction of Conformational B-cell Epitopes in Structure of Protein - Megha
Title » Prediction of Tumor Homing Peptides using Protein Language Models - Devansh Gupta
Title » Computational methods for cell-free DNA based diagnostics - Mariyam Siraj
Title » Inferring crucial pathways needed for differentiation of stem cells to required lineage - Haseena A
Title » Advancing Gene Signature Discovery with Generative Models: A Case Study Ovarian Cancer - Alok Anand
Title » PRole of Cofactors/Co-enzymes in Stabilizing Protein-Ligand Complexes -Harnoor Kaur Anand
Title » Deep Learning-Based Image-to-SMILES Conversion of 2D Chemical Structures - Alisha
Title » Microbial strain variations co-ovary with life-style, health and community-ecology - Ana Sharma
Title » Gene Regulatory Network Inference by Reducing Dimensions for Single-cell transcriptome profiles - Ankur Meshram
Title » Graph-Based Deep Learning for pIC₅₀ Estimation in Cancer Drug Screening - Rushikesh Sanjay Jadhav
Title » Deep Learning-Based Protein Thermal Stability Prediction - Umang Sharma
Title » Benchmarking Fold Recovery: Implicit-Solvent Atomistic & Coarse Grained Simulations of Two Vs Non Two State Proteins - Mimansha Das
Title » Estimating functions and effects of enhancers on cellular regulation - Samiksha Maurya
Title » Deciphering putatively transmembrane and secreted human gut microbial Prolyl endopeptidases: Therapeutic implications for Celiac Disease - Kavya Bai O P
Title » Mechanistic Insights into the Hepatoprotective Activity of Terminalia arjuna - Deepshika Tiwari
Title » Mechanistic Insights into Marigold Phytochemicals and Their Therapeutic Potential - Sarvani Gupta
Title » Comparing the Performance of Quantum Descriptors and Classical Descriptors based ML Models for Drug-like Property Prediction - Riya
Title » Global investigation of methanogen prevalence across gut microbiomes - Akanksha Singh
Title » Challenges In the Prediction of Half-life of lncRNAs - Shaik Shuhail
Title » A Comprehensive Compilation of Anticancer Peptides and Prediction of Anticancer Activity in Chemically Modified Peptides - Milind Chauhan
Title » Adaptive Biomedical Knowledge Graph Querying: Orchestrating Multi-Agent AI for Complex Data Retrieval - Rahul Kharakwal
Title » Machine Learning provides preliminary snapshots of disease-specific variations in gut microbial aging-trajectories - Seerapthynath T R
Title » AntiCP3: Prediction of Anticancer Proteins using Evolutionary Information from Protein Language Models - Amisha Gupta
Title » AI-Driven Constrained Mathematical Models of Biological Systems - Alka Singh
Title » Expansion of pre-existing Knowledge Graphs using LLMs - Kartikay Joshi
Title » Challenges in Understanding Cell-Cell Communication for Tumor Microenvironment using Spatial Transcriptomics - Gowtham K V
Title » Targeting Neutrophil Elastase in Alpha-1 Antitrypsin Deficiency: A GenAI-Based Approach for Peptide Inhibitor Discovery - Prateek Paul
Title » Prediction of Conformational B-cell Epitopes in Structure of Protein - Megha
Title » Prediction of Conformational B-cell Epitopes in Structure of Protein - Megha

2022 - 24 Batch

Title » A deep learning approach for predicting antimicrobial resistance across various bacterial species using whole genome sequence - Prateeksha Muddemmanavar
Title » Unveiling E. coli Adaptation Dynamics with protein language model and random walk - Nancy Jaiswal
Title » Introducing the Health-Associated Core Keystone (HACK) index: A universal ranking order of gut microbial taxa for selection of next generation probiotic and biotherapeutics - Abhishek Goel
Title » Development of the scoring function for protein-ligand binding affinity by implementing graph-theory based approaches - Shikha Singh
Title » Developing machine learning and deep learning models for predicting the thermal stability of proteins’’ - Surabhi Singh
Title » Machine Learning Based Design Of Multi-targeting Inhibitors for Alzheimer's Disease and Structure-Based Validation - Virendra kumar
Title » Developing Machine Learning And Deep Learning Models For Predicting The Folding Rates Of Proteins And Peptides - Reegina Tyagi
Title » Microbiome Surfaceome and Secretome Atlas: Building a dictionary of putative surface and secreted proteins on the human microbiome - Lavanya CB
Title » Machine learning and Tanimoto similarity based virtual screening of Chemical Libraries to Develop Novel PD Therapeutics - Divyanshi Singhal
Title » Deep learning-based Alzheimer’s disease diagnostics using medical images - Mohammad Seraj
Title » Machine Learning And Deep Learning Models for Prediction of Protein-ligand Binding Affinity - Parneet Kaur

2021 - 23 Batch

Title » Novel Framework for Predicting Multitarget Antifungal Drugs against Pathogenic Fungi - Karthika S
Title » Computational Design of Multi-targeting Lead-Compounds to Disrupt Quorum Sensing Pathway for Combating Drug-resistant Gram-negative Bacteria Superbugs - Dilip Kumar Yadav
Title » Identifying novel caloric restriction mimetics using generative AI - Jeet Nanshi
Title » Insights into the mechanisms of resistance to Axitinib in cancer cell lines - Khyati Patni
Title » Machine Learning-Assisted Chemo Multi-Omics Integration for Anti-Cancer Drug Response Prediction - K Maheswari
Title » Decoding the molecular basis of Iterative Stress Response (ISR) - Anmol Aggarwal
Title » Analysis of Gene Expression and Structural Variations in Common Genes Across Populations: Implications for Cardiovascular Disease and Reverse Cholesterol Pathway - Shivansh Verma
Title » Machine Learning And Deep Learning Models For Solvation Energy Prediction - Tejas
Title » Meta-analytic investigation of gut microbial community structure identifies a panel of stability-promoting microbiome members consistently reduced with gut inflammation - Amit Samal
Title » Structural, Kinetic, and dynamical analysis of receptor-activated proteolysis - Harika G L
Title » ThpPred: An ML-based tool for predicting therapeutic proteins/peptides - Srijanee Gupta
Title » Machine Learning aided Cancer drug response prediction using chemo-genomic data - Prashant Sharma
Title » Compilation and mining of peptide hormones and their receptors - Dashleen Kaur
Title » A Mobile Application for Dish Detection in Food Platters By Deploying an Object Detection Computational Protocol - Nitesh Narwade
Title » Validating and Benchmarking Deep Learning Model for Protein-Ligand Binding Affinity Prediction - Aparna C
Title » Deicphering Heterogeneous structure using Cryo-electron microscopic images - Chandan Saini
Title » Signatures and Utility of Epigenetic Memory at Enhancers - Rajat Tadulkar
Title » Identification of yeast strains for anit-cancer drug screening - Padmasini R
Title » Deciphering Genetic Bias Underlying in Global Population for Lipid Homeostasis - Himanshi Garg
Title » Development of in silico models for predicting Alzheimer’s disease from single cell genomics - Aman Srivastava
Title » Artificial Intelligence based models for Predicting Head and Neck Cancer from Genomics data of Single Cells - Akanksha Jarwal
Title » Assessment of Data-Driven and Deterministic Approaches for Predicting Bace-1 Inhibitor Binding Affinities - Amaithi Piriya S

2020 - 22 Batch

Title » Designing Circulating-tumor cells (CTCs) detection pipeline using co-measurement data of Single-Cell RNA and Targeted DNA Sequencing - Omkar Chandra
Title » Finding Unique Pattern in Transcriptome and Epigenome of Cancer Cells - Arpit Mathur
Title » Studying Priming and Poising of Cells - Ansari Ariba Abdul Majeed
Title » Meta-pathway based analysis of stemness - Saurav Kumar Choudhary
Title » Analysis of different RNA based liquid biopsy - Vikash Dabas
Title » Manual Curation of Virus Based Vaccines and Prediction of B-Cell Epitopes using Machine Learning Techniques. - Sadhana Tripathy
Title » “AI based prediction of HLA-DRB1*04:01 binder for designing subunit vaccines. - Sumeet Patiyal
Title » Database on bacterial vaccines and prediction of bacterial protective antigens. - Satakshi Gupta
Title » Protein-based in silico models to predict infectious strains of Influenza A - Trinita Roy
Title » Genome-based in silico models to predict infectious strains of Influenza A and Rotavirus A - Khushal Sharma
Title » Transfer learning and consensus clustering-based analysis of single-cell data - Dinesh Joshi
Title » A study of meta-learning and transfer learning approaches for clustering of single cell expression data. - Rishabh Munjal
Title » Blood based prediction of immune mediated disorders from bulk RNA-seq data. - Shivanshu Kukrety
Title » Insight for RNA-DNA interaction for regulation of activity of repeat elements and genes. - Neetesh Chauhan
Title » Brain correlates of cognitive-behavioural manifestations in Autism Spectrum Disorder. - Achyuthanand K.

2019 - 21 Batch

Title » Network Biology of Inflammatory Bowel Diseases - Tushar Dhyani
Title » Characterization of cell type boundaries using Spatial Transcriptomic studies. - Debashish Mohanta
Title » Elucidating the functional basis of Odorant Receptor genes pseudogenization in humans. - Radhika Arora
Title » RNA based lineage tracking in olfaction and aging. - Sidrah Maryam
Title » Modeling the dynamics of Telomere End Replication - Ghanendra Singh
Title » A Computational Framework to Study Levodopa Induced Dyskinesia Effect in Parkinson’s Disease. - Kajal Singla

2018 - 20 Batch

Title » Genomic Investigation of Major Depressive Disorder - Rohit Gupta
Title » PathoMap: Gene-Organ Relationships A Literature-based Investigation, Visualization & Analysis - Abhijit Raj
Title » Pathway-based Analysis for Cell Culture Conditions - Vaibhav Mittal
Title » PredictingTuberculosis Progression from RNA Seq Data using Machine learning. - Vikram Kumar
Title » Developing Gene Interaction Network from Public Literature and Genomic Data to Learn Gene Regulations.- Ayush Garg
Title » Deciphering the Role of lncRNA in Tuberculosis Progression - Jyotsana Mehra
Title » Tracking age-related changes in mRNA homeostasis at single cell resolution. - Princey Yadav
Title » Disease semantics - Neha Jha
Title » Across-study transfer learning strategy for improved analysis of single cell expression data. - Sanket Suhas Deshpande
Title » LeukemiaDB: A Database of Biomarker for Blood Cancer - Anjali Walia
Title » Compilation and Prediction of Prostate Cancer Biomarkers - Dikscha Sapra
Title » Manually curated database of biomarkers for thyroid cancer and stage classification. - Deepti Batra
Title » Assessment of drug efficacy in Indian population: A pharma-genomic study.- Neha Mishra
Title » CancerSmell: Molecular basis of chemosensation in cancer cells. - Siddhant Kalra
Title » Automated Discovery of Abstracts Reporting Gene-Disease Relationship. - Divya Sharma

2017 - 19 Batch

Title » An fMRI investigation of Autism Spectrum Disorder: Detection and Analysis. - Meghal Dani
Title » Stage classification of clear cell renal cancer based on gene expressions. - Akshita Sawhney
Title » Finding correct mouse model for human cells using single cell genomics - Abhishek Agarwal
Title » Prediction of sweetness using machine learning models - Aditi Sharma
Title » Cell free analysis in detection of diseases - Rohit Kumar Verma
Title » Predicting health phenotype of neonates in electronic NICU environment to identify early markers of disease physiology - Tanya Singh
Title » Predicting health phenotype of neonates in electronic NICU environment to identify early markers of disease physiology - Sunidhi Sharma
Title » Computational resources for predicting rare diseases associated mutations in lysosomal enzymes - Sana Akhter
Title » Personalised antibiotic prescription in urinary tract infection - Shivam Sharma

2016 - 18 Batch

Title » Tandem Mass Spectrometry workflow in El-MAVEN - Shubhra Agrawal
Title » Acquiring metabolic insights from embryonic stem cells scRNAseq data - Nikita Gupta
Title » Design Computational annotation of mutation-specificity of therapies from genome scale data-sets - Gauri Mittal
Title » An fMRI investigation of the effects of Yoga Nidra meditation on the brain using inter-subject correlations. - Vaibhav Tripathi
Title » Tracking Aging-Related Changes in Blood at Single Cell Resolution - Ayushi Gupta
Title » Revealing dynamic architecture of lipidated proteins - Arvind Krishnamurthy
Title » Graph Signal Processing based analysis of biological networks - Divyanshu Srivastava
Title » Application of pattern mining on data of flavor molecules, their percepts and molecular features - Biswadeep Khan
Title » Protein Classification on the basis of Thermal Stability using Supervised Learning - Ankit Sharma

2015 - 17 Batch

Title » A Systems Approach to Understand the ICU Co-morbidome - Dilraj Kaur
Title » A study of Biomedical Information Extraction systems: Designing a tool to extract symptoms from clinical text - Shrey Gupta
Title » Control of complex networks - Dicksha Chohan
Title » Population Genomics of Middle Eastern countries : A case study on Qatar population - Parul Sharma
Title » Kinetic Monte Carlo Based Study of Bcl-2 Family Members-Targeted Cancer Therapeutics - Mehak Sablok
Title » Gene expression analysis of the nutrients for type 2 diabetes - Keshav Bhojak
Title » Integration of Multi-Omics datasets in cancer - Sphoorti Sood
Title » FragSTR: An open source STR marker analysis tool - Prateek Singh
Title » Integrated Gene expression analysis of healthy controls across all data sets available of the genes implicated in Type 2 diabetes mellitus complications. - Richa Rashmi

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